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Biodiversity Informatics & Herbarium Digitization

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IDTitleSection/TopicAuthorsKeywords
924A Digital Flora for Wheaton Regional Park, Montgomery County, MarylandBiodiversity Informatics & Herbarium DigitizationKoenemann, Daniel; Durand, Amber; Burke, Janelle.specimen digitization
Floristics
217A new phenological metric for use in pheno-climatic models: a case study using herbarium specimens of Streptanthus tortuosusBiodiversity Informatics & Herbarium DigitizationLove, Natalie; Park, Isaac; Mazer, Susan.
279A Summation of the Impact of Glue and Other Materials in Herbaria ArchivalBiodiversity Informatics & Herbarium DigitizationHorton , Dasha Marika.curation
herbaria
adhesives
protocols
herbarium
archival 
658BIOSPEX 3.0—A Basecamp for Launching, Advertising, and Managing Biodiversity Specimen Digitization ExpeditionsBiodiversity Informatics & Herbarium DigitizationMast, Austin; Bruhn, Robert; Riccardi, Greg.BIOSPEX
citizen science
digitization
education
outreach
878Capturing California’s Flowers at the Beach: Herbarium Specimen Imaging at Long Beach State (LOB)Biodiversity Informatics & Herbarium DigitizationOlmeda, Bryana; Cuadra, Sara; Barnett, Angel; Rice, Marina; Fisher, Amanda.herbarium
digitization
76Capturing flowering time data from herbarium specimens: The California Phenology TCNBiodiversity Informatics & Herbarium DigitizationPearson, Katelin; Yost, Jenn.digitization
herbarium
phenology
biodiversity
natural history collections
562ColectoR, a digital field notebook for voucher specimens collection for AndroidBiodiversity Informatics & Herbarium DigitizationMaya Lastra, Carlos Alonso.botany app
herbarium labels
plant collection
766Comparing Leaf Reflectance Analysis Prediction Models Based on Dried Whole Leaf Tissue against Dried Ground TissueBiodiversity Informatics & Herbarium DigitizationValdiviezo , Milton I; Dowell, Jordan; Mason, Chase.foliar chemistry
Cornus
SVM
functional traits
reflectance spectroscopy
remote sensing
nutrient content estimation
machine learning
Hypersepctral reflectance
spectroscopy
937Digitized herbaria reveal substantial variation in plant phenological responses to climate across the eastern United StatesBiodiversity Informatics & Herbarium DigitizationPark, Daniel; Breckheimer, Ian; Ellison, Aaron; Davis, Charles.phenology
herbarium specimen images
digitization
crowdsourcing
citizen science
climate change
307DNA Analysis of UVSC Herbarium Specimens and Comparison of CTAB and Kit Extractions by Bryson JohnsonBiodiversity Informatics & Herbarium DigitizationJohnson, Bryson.Barcoding
herbarium
Sequencing
DNA Extraction
698Extending U.S. Biodiversity Collections to Address National ChallengesBiodiversity Informatics & Herbarium DigitizationMONFILS , ANNA K; Thiers, Barbara.natural history collections
digitization
Herbarium Specimens
extended specimen network
218How to convince your institution to digitize its herbariumBiodiversity Informatics & Herbarium DigitizationKnox, Eric.herbarium
digitization
specimen imaging
georeferencing
data management
public service
259LeafMachine: Using Machine Learning to Automate Phenotypic Trait Extraction from Herbarium VouchersBiodiversity Informatics & Herbarium DigitizationWeaver, William; Ng, Julienne; Laport, Robert.machine learning
convolutional neural networks
support vector machines
herbarium
herbarium specimen images
digitized herbarium data
morphology
1048Long live the census: the (floristic) census is deadBiodiversity Informatics & Herbarium DigitizationHaughland, Diane L.; Crisfield, Varina; Huggard, David; Dennett, Jacqueline; Nielsen, Scott.plant survey
detectability
observer effects
survey design
Alberta Biodiversity Monitoring Institute
monitoring
489Measuring Changes in Phenology of Oklahoma Asteraceae Species: Using Herbarium SpecimensBiodiversity Informatics & Herbarium DigitizationUnterschuetz , John Alexander; Moore, Abigail; Messick, Jenna.Herbarium Specimens
phenology
climate change
Asteraceae
Oklahoma
89Next generation identification keys: A method for implementing continuous characters and estimating the probability of an IDBiodiversity Informatics & Herbarium DigitizationTyrrell, Christopher.key
morphology
taxonomic
Bayesian
identification
706No Collection Left Behind: Research Contributions of Small CollectionsBiodiversity Informatics & Herbarium DigitizationMONFILS , ANNA K; Cahill, Blake.biodiversity
herbaria
digitization
541Physcraper: automatic updating of phylogeniesBiodiversity Informatics & Herbarium DigitizationKandziora, Martha; McTavish, Emily Jane.Phylogenetics
workflow
python
automatic updating
784Regional Patterns of Phylogenetic Diversity across a Biodiversity Hotspot (North American Coastal Plain)Biodiversity Informatics & Herbarium DigitizationKinser, Taliesin; Soltis, Pamela; Soltis, Douglas.phylogenetic diversity
north american coastal plain
southeastern USA
Herbaria databases
biodiversity hotspot
981Restructuring the LSU Herbaria after doubling in sizeBiodiversity Informatics & Herbarium DigitizationLagomarsino, Laura; Kluse, Jennifer.herbarium
digitization
biodiversity informatics
southeastern USA
Louisiana
SERNEC
274Spatial Phylogenetics of the North American FloraBiodiversity Informatics & Herbarium DigitizationMishler, Brent; Guralnick, Robert; Soltis, Pamela; Smith, Stephen; Soltis, Douglas; Barve, Narayani ; Allen, Julie; Laffan, Shawn.biodiversity
North America
seed plants
phylogeny
endemism
phylogenetic diversity
phylogenetic endemism
240Spring- and fall-flowering species show diverging phenological responses to climate in the Southeast USABiodiversity Informatics & Herbarium DigitizationPearson, Katelin.phenology
biodiversity
phenological shifts
climate change
herbarium specimen images
digitized herbarium data
herbarium
823The USA National Phenology Network: Tools and data to advance science and improve decision-makingBiodiversity Informatics & Herbarium DigitizationGerst, Katharine; Crimmins, Theresa; Denny, Ellen; Marsh, Lee; Rosemartin, Alyssa; Switzer, Jeff; Weltzin, Jake.phenology
seasonality
citizen science
ecological forecasting
phenological mismatch
532Undergraduate Student Learning With Extraction of DNA from Herbarium SpecimensBiodiversity Informatics & Herbarium DigitizationRosati , Ethan M; Samuel, Sam.herbarium
DNA
Extraction
Digitalization
genetics
Sequencing
specimens

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