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Systematics

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IDTitleSection/TopicAuthorsKeywords
929A dated molecular perspective of eucalypt evolution
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SystematicsThornhill, Andrew.eucalypts
molecular dating
bamm
Myrtaceae
diversification
evolution
341A flow-cytometry survey of Hedera in North America
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SystematicsWhittemore, Alan.Hedera
Araliaceae
invasive plants
polyploidy
713A history of Vines in the Andes, is Passiflora alnifolia one or 15 species?
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Systematicsacha, serena; Edwards, Christine; MacDougal, John.2b-RAD seq
Passiflora
Decaloba
Andes
977Anchored Hybrid Enrichment yields insights into Salvia (Lamiaceae) Phylogentics
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SystematicsDrew, Bryan; Kriebel, Ricardo; González-Gallegos, Jesús; Celep, Ferhat; Lemmon, Alan; Lemmon, Emily; Sytsma, Kenneth.Salvia
Lamiaceae
Anchored hybrid enrichment
717A Phylogenetic Survey of Myrtaceae in the Greater Antilles
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SystematicsFlickinger, Jonathan A.; Jestrow, Brett; Oviedo Prieto, Ramona; Santiago-Valentín, Eugenio; Sustache-Sustache, Jose; Jiménez-Rodríguez, Francisco; Campbell, Keron; Commock, Tracy; Francisco-Ortega, Javier.Caribbean 
systematics
biodiversity hotspot
904A RADseq Phylogeny of Barleria (Acanthaceae) Resolves Fine-Scale Relationships
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SystematicsComito, Robert; Darbyshire, Iain; McDade, Lucinda; Fisher, Amanda.Barleria
systematics
Acanthaceae
RADseq
ddRAdseq
Phylogenetics
Lamiales
730Around the world in 30 million years: Phylogeny and biogeography of Tecomeae (Bignoniaceae)
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SystematicsRagsac, Audrey; Fabre, Paige; Sarkinen, Tiina; Olmstead, Richard.Tecomeae
Bignoniaceae
phylogeny
biogeography
systematics
637A Super-Matrix Approach to the Bignoniaceae Phylogeny
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SystematicsOlmstead, Richard; Ragsac, Audrey; Gosney, Mason James.Phylogenetics
systematics
taxonomy
Bignoniaceae
super-matrix
biogeography
281A visual representation of New Caledonian Syzygium (Myrtaceae) to aid identification
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SystematicsByng, James; Hequet, Vanessa; Xu, Jiawei; Snow, Neil.Visual key
Myrtaceae
New Caledonia
Leaf anatomy
Syzygium
1014Biogeography and classification of sedges (Carex, Cyperaceae) based on a global phylogeny
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SystematicsJiménez-Mejías, Pedro; Martin-Bravo, Santiago; Villaverde, Tamara; Escudero Lirio, Antonio Marcial; Roalson, Eric; Hipp, Andrew; Global Carex Group, The.Carex
phylogeny
classification
DiversificationDiversification
Cyperaceae
617Biogeography of Vochysiaceae: a phylogenomic approach
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SystematicsGoncalves, Deise; Ortiz, Edgardo; Shimizu, Gustavo; Jansen, Robert; Jansen, Robert; Simpson, Beryl.Neotropical
Afrotropical
disjunction
vicariance
dispersal
West Gondwana
735Biome shifts during the Late Miocene cooling period contributed to increased diversification rates in Euphorbiaceae vines
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SystematicsCardinal-McTeague, Warren; Wurdack, Kenneth; Gillespie, Lynn.Euphorbiaceae
Acalyphoideae
Plukenetieae
twining habit
stinging hairs
pseudanthia
biome shifts
diversification
1064Comparing effects of niche conservatism and niche evolution in Citharexylum (Verbenaceae)
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SystematicsFrost, Laura; Olmstead, Richard.Citharexylum
Verbenaceae
neotropics
biogeography
Niche Conservatism
niche evolution
diversification
477Complex patterns of reticulate evolution in Potentilla L. (Rosaceae) involving P. norvegica and the endemic North American Ivesioid clade
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SystematicsPersson, Nannie; Smedmark, Jenny; Eriksson, Torsten.systematics
reticulate evolution
allopolyploidy
Potentilla
Rosaceae
198Diversification Over Time: Constructing a Molecular Phylogeny of the Four O’Clock Tribe (Nyctaginaceae tribe Nyctagineae)
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SystematicsHumphreys, Emily; Edwards, Caroline; Last, Noah; Olivieri, Julia; Brunner, Anna; Mikenas, Jessica; Henzler-Lhasawa, Chamden; Douglas, Norman; Flores Olvera, Hilda; Ochoterena, Helga; Hernandez Ledezma, Patricia; Nosratinia, Sonia; LoPresti, Eric; Weber, Marjorie; Thulin, Mats; Perersen, Gitte; Friis, Ib; Moore, Michael.Nyctaginaceae
gypsum
Mirabilis
Commicarpus 
Boerhavia 
Acleisanthes
Abronia
phylogeny
312Diversification rates across lineages: how does biological meaning differ across model-based approaches?
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SystematicsSong, Mick; Tribble, Carrie; Martinez-Gomez, Jesus; Freyman, William; Hohna, Sebastian; Specht, Chelsea; Rothfels, Carl.bamm
revbayes
diversification
SSE
branch specific diversification rates
714Do Macroecological or Biogeographic Processes Better Explain the Patterns of the Eastern Asia – Eastern North America Floristic Disjunction?
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SystematicsMelton, Anthony; Folk, Ryan; Grady, CJ; Stewart, Aimee; Beach, James (Jim); Soltis, Pamela; Soltis, Douglas.ecological niche modelling
Niche Conservatism
biogeography
765Evaluating the circumscription of varieties of the Seaside fiddleneck Amsinckia spectabilis (Boraginaceae) using morphometric analyses of fruit characters
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SystematicsBalderas, Elijah; Hasenstab-Lehman, Kristen; Guilliams, C. Matt; Guilliams, C. Matt.Boraginaceae
California Channel Islands
Principle Components Analysis
Morphometric Analysis
990Evolution of the Potentilla breweri complex: hybridization and radiation in the Great Basin sky islands
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SystematicsDiNicola, Alexa; Ertter, Barbara; Sytsma, Kenneth.Potentilla
Rosaceae
Sky islands
Next Generation Sequencing
North America
molecular phylogenetics
common gardens
hybridization
1018Exploring Agave Phylogenomics with Nanopore MinION Technology
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SystematicsBogler, David; Worth, Nia.
272Exploring species boundaries of Thelesperma (Asteraceae) on gypsum using molecular phylogenetics
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SystematicsMcGarvey, Luisa; Jiao, Lynn; Hutchison, Vera; Joffe, Jonah; Douglas, Norman; Ochoterena, Helga; Flores Olvera, Hilda; Moore, Michael.gypsum
Asteraceae
phylogeny
Mexico
Coahuila
803Finding the cinquefoil phylogenetic backbone: Resolving the position of moving clades in Potentilla (Rosaceae)
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SystematicsEriksson, Torsten; Persson, Nannie; Toresen, Ingrid; Smedmark, Jenny; Andersen, Heidi.phylogeny
multispecies coalescent
low copy gene
Rosaceae
1056Full plastome phylogenetics of Hechtia (Bromeliaceae, Hechtioideae): Insights into phylogenetics and plastome evolution in a non-model organism
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SystematicsSiekkinen, Andy.Phylogenetics
Plastome evolution
Bromeliaceae
1003Generation gaps: Improving resolution at the tribal scale in the Gochnatieae (Compositae) with low-cost phylogenomic tools
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SystematicsGostel, Morgan; Funk, Vicki.evolutionary history
Next Generation Sequencing
microfluidics
phylogenomics
822Genetic diversity of Celtis pumila, an apomictic triploid, and its diploid relatives in eastern North America
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SystematicsHayes, Drew; Smith, Tyler; Whittemore, Alan.taxonomy
polyploidy
Microsatellites
flow cytometry
population genetics
894Herbarium Genomics: Testing for phylogenetic signal and assessing rarity in Chilean Loasaceae
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SystematicsCohen, Dylan.Loasaceae
Loasa
Chile
herbarium
RAD-seq
systematics
Andes
964Historical biogeography of the rock daisies (tribe Perityleae; Asteraceae) in the sky island archipelagos of the southwest U.S. and northern Mexico
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SystematicsLichter Marck, Isaac H; Baldwin, Bruce.aridification
Asteraceae
biogeography
dispersal
Edaphic evolution
Compositae
deserts
islands
paleoclimate
Perityleae
phylogenomics
rock daisies
Sky islands
296How to not be a strangler fig species: the extreme morphological variation in the neotropical Ficus aurea complex (sect. Americanae, Urostigma, Moraceae)
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SystematicsHernández Esquivel, Karen Beatriz; Piedra-Malagón, Eva; Cornejo-Tenorio, Guadalupe; Mendoza-Cuenca, Luis Felipe; González-Rodríguez, Antonio; Ruiz Sanchez, Eduardo; Ibarra-Manríquez, Guillermo.geometric morphometrics
integrative taxonomy
leaf shape
abiotic variables
multivariate analyses
772Integrative taxonomy: Investigating species boundaries in Malagasy Psorospermum using morphometrics and molecular phylogenetic methods
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SystematicsRanarivelo, Heritiana.Psorospermum
species delimitation
morphometrics
Gaussian mixture models
Madagascar
668Investigating the origins of the California Island mallows (Malva; Malvaceae) using phylogenetic tools
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SystematicsHasenstab-Lehman, Kristen; Kok, Silas; Guilliams, C. Matt; Guilliams, C. Matt.Malva
Lavatera
Malvaceae
Island diversification
Channel Islands
498Investigating the phylogenetics, divergence times and historical biogeography of Memecylon (Melastomataceae) with a target enrichment approach
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SystematicsAmarasinghe, Prabha; Joshi, Sneha; Page, Navendu; Wijedasa, Lahiru; Kathriarachchi, Hashendra; Stone, Robert Douglas; Merello, Mary; Kodandaramaiah, Ullasa; Cellinese, Nico.Memecylon
Melastomataceae
target enrichment
phylogeny
biogeography
1053Machine learning approach in resolving species complexes
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SystematicsSARYAN, PREETI; GUPTA, SHUBHAM; GOWDA, VINITA.species complex
Hedychium
spectral clustering
machine learning
465Morphological, molecular, and biogeographic evidence for the recognition of Euthamia hirtipes and E. scabra (Asteraceae, Astereae)
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SystematicsSzubryt, Marisa; Neubig, Kurt; Urbatsch, Lowell; Vargas-Rodriguez, Yalma.systematics
Phylogenetics
biogeography
hybridization
taxonomy
Asteraceae
Astereae
Euthamia
214Morphological and Molecular characterization of Curcuma longa (Zingiberaceae) from Ilorin/FRIN, Nigeria
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SystematicsTiamiyu, Bashir Bolaji; Lateef, Azeez Adebola; Mustapha, O.T.; Abdulkareem, K.A.; Garuba, T..Curcuma
matK
psbA-trnH
ITS
Zingiberaceae
728Optimizing Collections-based Extractions and Targeted Enrichment for Phylogenetic Analyses of Neotropical Costaceae (Zingiberales)
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SystematicsGuan, Clarice; Sass, Chodon; Valderrama, Eugenio; Specht, Chelsea.Costaceae
Zingiberales
herbaria
target enrichment
neotropics
1348Origin and Radiation of the Lysipomia sphagnophila (Campanulaceae) species complex based on nrITS sequence data
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SystematicsWuest, Victoria; Ayers, Tina.
336Patterns of ecological and genetic diversification among diploids, tetraploids, and hexaploids in closely related taxa of Phlox (Polemoniaceae)
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SystematicsFehlberg, Shannon; Prather, Alan; Ferguson, Carolyn.polyploidy
ecological niche modelling
Phylogenetics
flow cytometry
Phlox
Polemoniaceae
cytotype
748Phylogenetic analysis of Adenium (Apocynaceae) from chloroplast, mitochondrial, and nuclear markers
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SystematicsWeitemier, Kevin; Edwards, Taylor; Dimmitt, Mark.Multi-locus
Apocynaceae
Adenium
phylogeny
128Phylogenetic placement of Abarema s.s. (Caesalpinioideae, mimosoid clade)
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SystematicsGuerra, Ethiéne; Soares, Marcos Vinicius Batista; Morim, Marli Pires; Iganci, Joao.Inga Alliance
matK
ETS
Abarema Alliance
Tribe Ingeae
833Phylogenetics and species delimitation in riverweeds (Podostemaceae): Evolutionary processes across and within rivers
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SystematicsBedoya, Ana Maria; Olmstead, Richard.Podostemaceae
Phylogenetics
species delimitation
925Phylogenetics of Clematis subgenus Viorna
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SystematicsHarris, Jesse; Smith, Stacey.Clematis
ddRAD
Phylogenetics
338Phylogenomic data shed new light on the phylogeny of the subtribe Hyoseridinae (Asteraceae), with special emphasis on the origin of the woody Sonchus alliance in the Canary Islands
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SystematicsCho, Myong-suk; Mejías, José A.; Kim, Seung-Chul.Hyoseridinae
the woody Sonchus alliance 
The complete cp genome phylogeny 
Sonchus sensu lato
Sonchinae sensu Bremer 
Dendroseridinae sensu Bremer
738Phylogenomics of a prickly history: new insights into the evolution of Opuntia (Cactaceae)
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SystematicsKöhler, Matias; Font, Fabián; Oakley, Luis J.; Chies, Tatiana; Majure, Lucas.molecular phylogenetics
plastome
systematics
cacti
prickly pear
polyploidy
hibridization
biogeography
231Phylogeny informs the taxonomic revision of Goodenia sensu lato (Goodeniaceae)
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SystematicsJabaily, Rachel; Shepherd, Kelly; Gardner, Andrew; Sessa, Emily.Asterales
Australia
taxonomy
phylogeny
Next Generation Sequencing
Goodeniaceae
659Phylogeny of Carex sect. Phleoideae (Cyperaceae)
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SystematicsChung, Kyong-Sook.Cyperaceae
sect. Phleoideae
Carex
741Phylogeny of Rhynchospora section Plumosae (Cyperaceae) based on morphologic and molecular data
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SystematicsNaczi, Robert; Oommen, Ansel; Roberts, Mari; Dorey, Jenna; Calie, Patrick; Knapp, Wesley; Hardy, Sarah; Plunkett, Gregory.Rhynchospora
Rhynchospora section Plumosae
phylogeny
beaksedge
conservation
nutrient-poor
Cyperaceae
484Phylogeography and Propagule Bacterial Diversity Across the Florida Range of Red Mangroves (Rhizophora mangle; Rhizophoraceae)
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SystematicsScherer, Brendan; Mast, Austin.phylogeography
RADseq
mangrove
endophytes
16S
bacteria
135plastome phylogenomic analysis of thuja ((Cupressaceae)
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SystematicsAdelalu, Kole Fredrick; Wang, Hengchang.thuja
plastome
phylogenomics
335Recording and sharing phenotypes for the new Flora of Alaska
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SystematicsWebb, Campbell O.; Heitz, Brian; Ickert-Bond, Stefanie.Flora of Alaska
phenotypes
RDF
RDFS
OWL
TDWG’s SSD
814Relationships of California Floristic Province Menthinae (Lamiaceae)
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SystematicsHays, Mallory; Liu, Sitong; Elvin, Mark; Drew, Bryan.Menthinae
Lamiaceae
California Floristic Province
407Resolving relationships within the genus Amorpha using whole chloroplast genomes
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SystematicsMacNeill, Bryan; Straub, Shannon; Sandras, Kelli; Elizabeth, Ivey; McKain, Michael; McKain, Michael.Amorpha
Whole Chloroplast
genomics
hybridization
504Resolving the Phylogeny of the Genus Glossopetalon (Crossosomataceae)
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SystematicsAllen, Maya; Ayers, Tina.Crossosomataceae
systematics
Glossopetalon
ddRAD
RADseq
880Revision of the Trifolium depauperatum species complex
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SystematicsTressel, Lydia; Vincent, Michael.Fabaceae
species complex
Trifolium
669Revision of the Trifolium gracilentum species complex
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SystematicsRogers, Lauren; Vincent, Michael.Trifolium
western United States
Channel Islands
345Reviving a century-old palm (Washingtonia) mystery using the power of Genotyping by Sequencing (GBS)
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SystematicsVillanueva-Almanza, Lorena; Landis, Jacob; Ezcurra, Exequiel; Koenig, Daniel.Arecaceae
Baja California
Washingtonia
genetic structure
species delimitation
taxonomy
125Speak to me beardtongue: Phylogenetic analysis of the six Penstemon subgenera using whole chloroplast genome sequences
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SystematicsStettler, Jason.Penstemon
beardtongue
maximum likelihood
plastome
chloroplast genome
Phylogenetics
Lamiales
301Speciation on Sky Islands: The Systematics and Evolution of Cirsium eatonii (“Mountaintop Thistle”)
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SystematicsAckerfield, Jennifer.Compositae
Asteraceae
Cirsium
Rocky Mountains
Cirsium eatonii
Sky islands
93Systematics and evolutionary significance of the pod morphological and anatomical characters with special reference to the fruit dehiscence mechanism and ancestral state reconstruction reveals evolutionary trends in genus Crotalaria L
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SystematicsRATHER, SHABIR AHMAD; CHUN, SU; ZHAO-YANG, CHANG.Crotalaria
Pod morphology
anatomy
Dehiscence
evolution
691Target Capture Sequencing: application to phylogeny, biogeography, and divergence time for Rubus
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SystematicsCarter, K.A.; Liston, A.; Alice, Lawrence; Bassil, N.V.; Bushakra, J.M.; Sutherland, B.L.; Hummer, Kim.taxonomy
systematics
biogeography
Rubus
polyploidy
phylogenomics
germplasm
raspberries
blackberries
Rosaceae
hybridization
443Taxonomic discoveries in Nemacladus (Campanulaceae, Nemacladoideae)
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SystematicsMorin, Nancy; Ayers, Tina; Neff, Lois.Campanulacee
Nemacladus
California
southwestern flora
453Taxonomic implications of staminal filament appendages in Nemacladus (Campanulaceae)
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SystematicsNeff, Lois; Morin, Nancy.Nemacladus
phylogeny
character
appendage
251Taxonomy and Conservation of the genus Malacothamnus (Malvaceae)
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SystematicsMorse, Keir.Malacothamnus
Malvaceae
rare plants
conservation
RAD-seq
morphology
taxonomy
626Taxonomy of the Clematis viorna complex (Clematis subgenus viorna) of the southeastern United States.
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SystematicsIrick, Zach; Estes, Dwayne.
1039Testing biogeographic hypotheses in the tropical Andes using Lysipomia (Campanulaceae)
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SystematicsHansen, Kimberly; Ayers, Tina.biogeography
Campanulaceae
paramo
plastome
260The ginger lilies of the Indomalayan realm: a complex case of recent divergence and reticulate evolution
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SystematicsASHOKAN, AJITH; SALONY, SUSNATA; SARYAN, PREETI; GOWDA, VINITA.Hedychium
Indomalayan realm
phylogeny
Zingiberaceae
362The origin of Neotropical Trema (Cannabaceae) based on phylogenetic, fossil, and biogeographic data
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SystematicsNeubig, Kurt; Garwood, Nancy; Valencia Duarte, Janice; Szubryt, Marisa; Humphreys, Aelys; Jordan, Kristina; Whitley, Breanna; Russell, Stephen.Trema
neotropics
biogeography
phylogeny
ultrametric
fossil
869The phylogeny and biogeography of the genus Errazurizia (Fabaceae: Amorpheae)
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SystematicsBecklund, Leigh; Ayers, Tina.Errazurizia
Phylogenetics
Fabaceae
systematics
chloroplast genome
Whole Genome Sequencing
249The untouchables: taxonomy and phylogenetics of Cnidoscolus (Euphorbiaceae)
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SystematicsMaya Lastra, Carlos Alonso; Steinmann, Victor.Crotonoideae
sectional taxonomy
ITS
psbA-trnH
trnL-trnF
854The use of transposable elements as fingerprint tools to resolve the hybrid origin of the bamboo lineage
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SystematicsChalopin, Domitille; Clark, Lynn; Wysocki, William; Duvall, Mel; Bennetzen, Jeffrey.Bambusoideae
bamboo evolution
transposable elements
ancient hybridization
allopolyploidy
114The value of Botany in food safety: using phylogenetic tools and genomic data to design innovative detection methods for the allergenic nuts in the genus Carya
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SystematicsOtt, Brittany; Puente, Caroline; Zhang, Ning; Greenbaum, Alexandra; Windsor, Amanda; Wen, Jun; Sarmashghi, Shababeddin; Arabbaygi, Siavash; Bafna, Vineet; Timme, Ruth; Handy, Sara.allergens
DNA based identification
Carya
149Typifications and nomenclatural notes in Physalis (Solanaceae) from the United States
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SystematicsPretz, Chelsea; Deanna, Rocio.lectotypification
North America
Physalis
Solanaceae
tomatillo
United States
196Unfolding Potential New Taxa of Paperflowers (Psilostrophe) on Gypsum
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SystematicsAdler, Ava; Douglas, Norman; Flores Olvera, Hilda; Ochoterena, Helga; Moore, Michael.gypsum
Mexico
New Mexico
Texas
Coahuila
Asteraceae
phylogeny
548Untangling taxonomic complexities and the conservation of rare asters (Eucephalus, Asteraceae)
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SystematicsAllen, Geraldine; Kaye, Thomas; Kierstead, Julie.Asteraceae
Eucephalus
ITS
morphometrics
genetic diversity
rare plant conservation
697Using molecular and morphological data to separate cryptic species of rayless Grindelia (Asteraceae)
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SystematicsMonaghan, Leann; Moore, Abigail.Asteraceae
Grindelia
systematics
species delimitation
998Using phylogeny, genetics, ecology, conservation status and horticultural value to evaluate living collections
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SystematicsWorcester, Lindsey; Hipp, Andrew; Hoban, Sean; Lobdell, Matt; Rollinson, Christy; Westwood, Murphy.phylogeny
genetics
ecology
Conservation of biodiversity 
horticultural value
Living Collections
Tilia
Malus
Quercus
Ulmus
phylogenomics
885What is the current extent of our systematic knowledge? A case study in synthesizing phylogenetic data in Orobanchaceae
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SystematicsMortimer, Sebastian; Tank, David.Large-Scale Phylogenetics
Orobanchaceae
supermatrix

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